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Publications

Please find below a list of the top 10 papers published by members of the Grützner Lab based upon Google Scholar citations.

​A complete list of papers published is also provided below. 

Top 10 publications based on Google Scholar citations

  1. Brawand, D., et. al  (2011) "The evolution of gene expression levels in mammalian organs", Nature, 478:7369, pp 343-348

  2. Necsulea, A., et. al  (2014) "The evolution of lncRNA repertoires and expression patterns in tetrapods", Nature, 505:7485, pp 635-640

  3. Warren, W. C., et. al  (2008) "Genome analysis of the platypus reveals unique signatures of evolution", Nature, 453:7192, pp 175-183

  4. Cortez, D., et. al  (2014) "Origins and functional evolution of Y chromosomes across mammals", Nature, 508:7497, pp 488-493

  5. Rhie, A. et al (2021), "Towards complete and error-free genome assemblies of all vertebrate species", Nature 592:7856, pp. 737-746
    ​
  6. Nanda, I., et. al  (1999) "300 million years of conserved synteny between chicken Z and human chromosome 9", Nature Genetics, 21:3, pp 258-259

  7. Veyrunes, F., et. al  (2008) "Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes", Genome Research, 18:6, pp 965-973

  8. Grützner, F., et. al  (2004) "In the platypus a meiotic chain of ten sex chromosomes shares genes with the bird Z and mammal X chromosomes", Nature, 432:7019, pp 913-917

  9. Lynch, V. J., et. al  (2015) "Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy", Cell Reports, 10:4, pp 551-561
    ​​
  10. Nanda, I., et. al  (2000) "Conserved synteny between the chicken Z sex chromosome and human chromosome 9 includes the male regulatory gene DMRT1: a comparative (re) view on avian sex determination", Cytogenetic and Genome Research, 89:1-2, pp 67-78

Grützner Lab Publications

2022

Itoigawa, A. et al (2022), "Functional diversity and evolution of bitter taste receptors in egg-laying mammals", Molecular Biology and Evolution, 39:6

Stenhouse, A. et al (2022), "COVID restrictions impact wildlife monitoring in Australia", Biological Conservation, 276:109470

Perry, T. et al (2022), "EchidnaCSI: Engaging the public in research and conservation of the short-beaked echidna", Proceedings of the National Academy of Sciences, 119:5, pp. e2108826119

Perry, T. et al (2022), "Characterising the Gut Microbiomes in Wild and Captive Short-Beaked Echidnas Reveals Diet-Associated Changes", Frontiers in Microbiology, 13:687115

2021

Waters P.D. et al (2021), "Microchromosomes are building blocks of bird, reptile, and mammal chromosomes", Proceedings of the National Academy of Sciences, 118:45, pp. e2112494118

Pajpach, F. et al (2021), "Flavors of non-random meiotic segregation of autosomes and sex chromosomes", Genes, 12:9, pp. 1338

Pajpach, F. et al (2021), "Evolution, expression and meiotic behavior of genes involved in chromosome segregation of monotremes", Genes, 12:9, pp. 1320

Stenhouse, A. et al (2021), "
EchidnaCSI–improving monitoring of a cryptic species at continental scale using citizen science", Global Ecology and Conservation, 28:e01626

Zhou, Y. et al (2021), "Platypus and echidna genomes reveal mammalian biology and evolution", Nature 592:7856,  pp. 756-762

Rhie, A. et al (2021), "Towards complete and error-free genome assemblies of all vertebrate species", Nature 592:7856, pp. 737-746

Královičová, J. et al (2021), "Restriction of an intron size en route to endothermy", Nucleic Acids Research, 49:5, pp. 2460-2487

Mendoza, A. et al (2021), "The emergence of the brain non-CpG methylation system in vertebrates", Nature ecology & evolution, 5:3, pp. 369-378

Warren, W.C. & Grutzner, F. (2021), "The Evolution of Viviparity in Vertebrates", Placentation in Mammals, pp. 7-19

2020

Cheung, J. et al (2020), "Reduced gonadotrophin receptor expression is associated with a more aggressive ovarian cancer phenotype", International journal of molecular sciences, 22:1, pp. 71

Lee, E. et al (2020, "A Comprehensive Molecular and Clinical Analysis of the piRNA Pathway Genes in Ovarian Cancer", Cancers 13:1, pp. 4

Wang Z.Y. et al (2020), "Transcriptome and translatome co-evolution in mammals", Nature, 588:7839, pp. 642-647

2019

Rismiller, P.D. & Grutzner, F. (2019), "Tachyglossus aculeatus (Monotremata: Tachyglossidae)", Mammalian Species, 51:980, pp. 75-91

Perry, T. et al (2019), "
Non-invasive genetic sexing technique for analysis of short-beaked echidna (Tachyglossus aculeatus) populations", Reproduction, Fertility and Development, 31:7, pp. 1289-1295

Hirose, K. et al (2019), "
Evidence for hormonal control of heart regenerative capacity during endothermy acquisition", Science, 364:6436, pp. 184-188

Deakin J.E. et al (2019), "Chromosomics: bridging the gap between genomes and chromosomes", Genes, 10:627

Daish, T. & Grutzner, F. (2019) "Evolution and meiotic organization of heteromorphic sex chromosomes", Current Topics in Developmental Biology, 134, pp. 1-48

2018

Stenhouse, A. et al (2018) "Improving Data Quality in Citizen Science Apps for Conservation Biology", Biodiversity Information Science and Standards, 2:e26665

Martin, H.C. et al (2018), "
Insights into platypus population structure and history from whole-genome sequencing", Molecular Biology and Evolution, 35:5, pp. 1238-1252

Gautier, C. et al (2018), "Characterization of the Mel1c melatoninergic receptor in platypus (Ornithorhynchus anatinus)", PLoS One 13:3, e0191904

Jones, R.C. et al (2018), "Reproduction in Monotremes", in M.K. Skinner (ed.), Encyclopedia of Reproduction, 2nd edn., Academic Press.

​Lee, E. et al (2018), "PIWI-Interacting RNAs (piRNAs) and Cancer", Cancer and Noncoding RNAs, pp. 131-150

2017

Adikusuma, F. et. al  (2017) "Targeted deletion of an entire chromosome using CRISPR/Cas9", Cell, 25:8, pp. 1736-1738

Estrella, C.A.S. et. al  (2017) "Remodelling of the bovine placenta: Comprehensive morphological and histomorphological characterization at the late embryonic and early accelerated fetal growth stages", Placenta, 55, pp. 37-46

Casey, A.E. et. al  (2017) "Differential cohesin loading marks paired and unpaired regions of platypus sex chromosomes at prophase I", Scientific Reports, 7:4217

2016

Tsend-Ayush, E., et. al  (2016) "Monotreme glucagon-like peptide-1 in venom and gut: one gene-two very different functions", Scientific Reports, 6

2015

Daish, T. J., et. al  (2015) "Lack of sex chromosome specific meiotic silencing in platypus reveals origin of MSCI in therian mammals", BMC Biology, 13:1, pp 106

Casey, A. E., et. al  (2015) "Identification and characterisation of synaptonemal complex genes in monotremes", Gene, 567:2, pp 146-153

He, C., et. al  (2015) "Immunohistochemical analysis of pancreatic islets of platypus (Ornithorhynchus anatinus) and echidna (Tachyglossus aculeatus ssp.)", Journal of Anatomy, 226:4, pp 373-380

Lynch, V. J., et. al  (2015) "Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy", Cell Reports, 10:4, pp 551-561

2014

Lim, S. L., et. al  (2014) "Overexpression of piRNA pathway genes in epithelial ovarian cancer", PLoS One, 9:6, e99687

Cortez, D., et. al  (2014) "Origins and functional evolution of Y chromosomes across mammals", Nature, 508:7497, pp 488-493

​Necsulea, A., 
et. al  (2014) "The evolution of lncRNA repertoires and expression patterns in tetrapods", Nature, 505:7485, pp 635-640

2013

Lim, S. L., et. al  (2013) "Conservation and expression of PIWI-interacting RNA pathway genes in male and female adult gonad of amniotes", Biology of Reproduction, 89:6, pp 136

He, C., et. al  (2013) "Changes in the ghrelin hormone pathway maybe part of an unusual gastric system in monotremes", General and Comparative Endocrinology, 191, pp 74-82

Chang, C. L., et. al  (2013) "Widespread divergence of the CEACAM/PSG genes in vertebrates and humans suggests sensitivity to selection", PLoS One, 8:4, e61701

Ayers, K. L., et. al  (2013) "RNA sequencing reveals sexually dimorphic gene expression before gonadal differentiation in chicken and allows comprehensive annotation of the W-chromosome", Genome Biology, 14:3, R26

Long, H. K., et. al  (2013) "Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates", Elife, 2, e00348​

Zemann, A., et. al  (2013) "Ancestry of the Australian termitivorous numbat", Molecular Biology and Evolution, mst032

2012

Williams, C., et. al  (2012) "An exon splice enhancer primes IGF2: IGF2R binding site structure and function evolution", Science, 338:6111, pp 1209-1213

Hrdličková, R., et. al  (2012) "Insights into the evolution of mammalian telomerase: Platypus TERT shares similarities with genes of birds and other reptiles and localizes on sex chromosomes", BMC Genomics, 13:1, pp 216

Julien, P., et. al  (2012) "Mechanisms and evolutionary patterns of mammalian and avian dosage compensation", PLoS Biology, 10:5, e1001328

Tsend-Ayush, E., et. al  (2012) "Identification of mediator complex 26 (Crsp7) gametologs on platypus X1 and Y5 sex chromosomes: a candidate testis-determining gene in monotremes?", Chromosome Research, 20:1, pp 127-138

2011

Brawand, D., et. al  (2011) "The evolution of gene expression levels in mammalian organs", Nature, 478:7369, pp 343-348

Rowell, D. M., et. al  (2011) "Chromosome analysis in invertebrates and vertebrates", Molecular Methods for Evolutionary Genetics, 772, pp 13-35

Wright, M. L., et. al  (2011) "Replication timing: evolution, nuclear organization and relevance for human disease", in DNA Replication - Current Advances, ​Dr Herve Seligmann (Ed.)

2010

Lim, S., et. al  (2010) "Maelstrom-A protein that is essential for spermatogenesis and transposable repression is expressed in adult ovary of mammals and birds", Reproduction, Fertility and Development, 22:9, pp 62

​Grutzner, F., et. al  (2010) "Meiotic acrobats: monotreme sex chromosome organisation during spermatogenesis", Reproduction, Fertility and Development, 22:9, pp 23

Aitken, R. J., et. al  (2010) "Origins of DNA damage in spermatozoa", Reproduction, Fertility and Development, 22:9

Daish, T. J., et. al  (2010) "Meiotic sex chromosome inactivation", eLS

2009

Tsend-Ayush, E., et. al  (2009) "Higher-order genome organization in platypus and chicken sperm and repositioning of sex chromosomes during mammalian evolution", Chromosoma, 118:1, pp 53-69

Daish, T., et. al  (2009) "Platypus chain reaction: directional and ordered meiotic pairing of the multiple sex chromosome chain in Ornithorhynchus anatinus", Reproduction, Fertility and Development, 21:8, pp 976-984

Ivell, R., et. al  (2009) "Evolution and male fertility: lessons from the Insulin-Like Factor 6 gene (Insl6)", Endocrinology, 150:9, pp 3986-3990

Kortschak, R., et. al  (2009) "Analysis of SINE and LINE repeat content of Y chromosomes in the platypus, Ornithorhynchus anatinus", Reproduction, Fertility and Development, 21:8, pp 964-975

Tsend-Ayush, E., et. al  (2009) "Characterisation of ATRX, DMRT1, DMRT7 and WT1 in the platypus (Ornithorhynchus anatinus)", Reproduction, Fertility and Development, 21:8, pp 985-991

Daish, T., et. al  (2009) "Location, location, location! Monotremes provide unique insights into the evolution of sec chromosome silencing in mammals", DNA and Cell Biology, 28:2, pp 91-100

Ho, K., et. al  (2009) "Replication asynchrony and differential condensation of X chromosomes in female platypus (Ornithorhynchus anatinus)", Reproduction, Fertility and Development, 21:8, pp 952-963

Warren, W., et. al  (2009) "The enigma of the platypus genome", Australian Journal of Zoology, 57:3-4, pp 157-165

2008

Grutzner, F., et. al  (2008) "Reproductive biology in egg-laying mammals", Sexual Development, 2:3, pp 115-127

Veyrunes, F., et. al  (2008) "Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes", Genome Research, 18:6, pp 965-973

Ordonez, G., et. al  (2008) "Loss of genes implicated in gastric function during platypus evolution", Genome Biology (Online Edition), 9:5, pp R81-1-R81-11

Schmitz, J., et. al  (2008) "Retroposed SNOfall - A mammalian-wide comparison of platypus snoRNAs", Genome Research, 18:6, pp 1005-1010

Wakefield, M., et. al  (2008) "Cone visual pigments of monotremes: filling the phylogenetic gap", Visual Neuroscience, 25:3, pp 257-264

Warren, W., et. al  (2008) "Genome analysis of the platypus reveals unique signatures of evolution", Nature, 453:7192 , pp 175-184

Murchison, E., et. al  (2008) "Conservation of small RNA pathways in platypus", Genome Research, 18:6, pp 995-1004

Niwa, H., et. al  (2008) "Platypus Pou5f1 reveals the first steps in the evolution of trophectoderm differentiation and pluripotency in mammals", Evolution and Development, 10:6, pp 671-682

2007

McMillan, D., et. al  (2007) "Characterizing the chromosomes of the platypus (Ornithorhynchus anatinus)", Chromosome Research, 15:8, pp 961-974

Mogharbel, N., et. al  (2007) "DMRT gene cluster analysis in the platypus: new insights into genomic organization and regulatory regions", Genomics, 89:1, pp 10-21

Wallis, M., et. al  (2007) "Sex determination in platypus and echidna: autosomal location of SOX3 confirms the absence of SRY from monotremes", Chromosome Research, 15:8, pp 949-959

Wallis, M., et. al  (2007) "Mapping platypus SOX genes; autosomal location of SOX9 excludes it from sex determining role", Cytogenetic and Genome Research, 116:3, pp 232-234

Dohm, J., et. al  (2007) "Disruption and pseudoautosomal localization of the major histocompatibility complex in monotremes", Genome Biology (Online Edition), 8:8, pp R175-1-R175-16

Rens, W., et. al  (2007) "The multiple sex chromosomes of platypus and echidna are not completely identical and several share homology with the avian Z", Genome Biology (Online Edition), 8:11, pp R243:1-R243:21

2006

Delbridge, M., et. al  (2006) "Assignment of SOX1 to platypus chromosome 20q by fluorescence in situ hybridization", Cytogenic and Genome Research, 112:3-4, pp 342L-1-342L-2

Sankovic, N., et. al  (2006) "Construction of a highly enriched marsupial Y chromosome-specific BAC sub-library using isolated Y chromosomes", Chromosome Research, 14:6, pp 657-664

Grutzner, F., et. al​  (2006) "How did the platypus get its sex chromosome chain? A comparison of meiotic multiples and sex chromosomes in plants and animals", Chromosoma, 115:2, pp 75-88

Ezaz, T., et. al  (2006) "An XX/XY sex microchromosome system in a freshwater turtle, Chelodina longicollis (Testudines: Chelidae) with genetic sex determination", Chromosome Research, 14:2, pp 139-150

Yue, Y., et. al  (2006), "Segmental duplication associated with evolutionary instability of human chromosome 3p25", Cytogenetic and Genome Research, 112:3-4, pp 202-207

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  • Research
    • Current research
    • Honours and PhD Opportunities
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  • People
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  • Contact